On the basis of analyzing essence of land ticket system of Chongqing Municipality and its transaction process, this paper studies the relationship between government and farmers and between city and countryside, and discusses the drawbacks of land ticket system in Chongqing Municipality. Results show that inherent drawbacks of land ticket system and wrong guidance of policies lead to suspicion of land ticket system occupying rural resources. Interregional exploitation and generation exploitation are inherent mechanism of city exploiting countryside. Finally, it proposes increasing construction land index to satisfy demand of new socialist countryside construction primarily, to ensure rural social stability; Later, use land ticket index to fill the gap of construction land in economically developed areas, so as to alleviate conflict of urban land use and maximize circulation value of rural construction land. It is expected to provide theoretical reference for relevant departments to regulate land ticket transaction system and realize harmonious development ,between urban and rural areas.