Through an empirical analysis of the agricultural logistics model and agricultural products quality control system in Pinggu district of Beijing, a model was studied to control the agricultural quality by agricultural logistics. The model adopts modern logistics supply chain, which firstly, establishes a modern logistics distribution system for veterinary drugs by the means of suppliers control, chain management and cold chain distribution; secondly, organizes the veterinary experts and doctors to provide real-time technical services so as to control the abuse of drugs; thirdly, realizes the supervision of local veterinary drugs and diseases. Thus the quality of animal products is guaranteed, and the model is worthy to be popularized.