Sequence analysis with Stata

We describe a general strategy to analyze sequence data and introduce SQ-Ados, a bundle of Stata programs implementing the proposed strategy. The programs include several tools for describing and visualizing sequences as well as a Mata library to perform optimal matching using the Needleman–Wunsch algorithm. With these programs Stata becomes the first statistical package to offer a complete set of tools for sequence analysis.


Issue Date:
2006
Publication Type:
Journal Article
DOI and Other Identifiers:
st0111 (Other)
PURL Identifier:
http://purl.umn.edu/118169
Published in:
Stata Journal, Volume 06, Number 4
Page range:
435-460
Total Pages:
26

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 Record created 2017-04-01, last modified 2017-10-13

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